If the property is empty then the only means of escape issues you will have will be with the safety of contractors or staff entering the building to carry out routine checks or to do work to the building. You will have to ask yourself, does the lack of sprinklers affect these people's means of escape. If so, then some compensatory measures will be required, but this is not likely. More likely, the lack of sprinklers will have no effect on the means of escape for a few people for a few hours a week and so you can rest easy on that score and amend the FRA appropriately.
To be able to gauge what any possible compensatory measures might be, in the unlikely event that they are required for means of escape, more information should be furnished about the building.
A important question is, why were the sprinklers installed in the first place? If you know the answer to this, then you know the consequences of their disablement.
This sounds more like a property protection issue so the insurance company are likely to be the only party that is particularly interested. They might be unconcerned about the lack of sprinklers if there is now no fire loading in the building (other than the structure of the building itself). They should re-calculate the premium based on the new circumstances. If the sprinklers were critical to the protection of the building for some reason they may have more concerns but you've got to take all that up with them.
The insurance company might have something to say about the security of the building. Any illicit entry carries a high risk of arson with it. Probably the best advice for compensatory measures you can get is to up the site security. Provided the building stays empty it has a very low risk of a fire starting and if no fire starts then the sprinklers aren't needed.
Stu