The reason for the specification, particularly of MICC cable, is to minimise intrusion of the cable both visually and through the fabric. IE it does not need conduit, surface-mounted or chased into the fabric to conceal said conduit, or large holes drilled through the fabric.
The reasons for this are to minimise irreplaceable disruption of the fabric in what may be an ancient and listed building. There is a booklet 'Wiring in Churches' published by the Council for the Care of Churches - see
www.ccc.c-of-e.org.uk - which explains much of the needs of churches regarding electrical installations.
It is possible that the reference to FP200 etc is a misunderstanding related to the booklet's chapter on fire-alarm system wiring.
The electrician's reference to 'area office or adviser' suggests this may be an Anglican church and the Diocesan Advisory Committee are involved in giving authority for the works, as they have to by law.
Hope the above is of help.